About 13 entries found
Sl.NoContigsSSR Type
1 ABNAPEX.FASTA.CONTIG67 (A)20
2 ABNAPEX.FASTA.CONTIG85 (A)20
3 ABNAPEX.FASTA.CONTIG70 (A)46
4 ABNAPEX.FASTA.CONTIG51 (T)21
5 ABNAPEX.FASTA.CONTIG69 (T)21
6 ABNAPEX.FASTA.CONTIG29 (T)26
7 ABNAPEX.FASTA.CONTIG50 (T)43
8 ABNAPEX.FASTA.CONTIG84 (T)52
9 IMMZYGRYO.FASTA.CONTIG2 (AG)35
10 MALEINFLOR.FASTA.CONTIG49 (AG)16
11 ABNAPEX.FASTA.CONTIG47 (CT)17
12 IMMZYGRYO.FASTA.CONTIG6 (TATG)5
13 NORMALAPEX.FASTA.CONTIG11 (CTCTCC)4
The Computational analysis of Oil Palm contigs - SSR by TROLL( Martins et al. 2006 )

 

SSR type
Total
Percentage

Monomer

8
61.54%

Dimer

3
23.07%

Tetramer

1
7.69%

Hexamer

1
7.69%

Total number of sequences analyzed:187

Total number of SSRs found in sequences: 13

Mononucleotide 'T' has repeated 5 (38.46%) times of the total SSR

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS