The Computational analysis of Cocoa EST - SSR by TROLL(Martins et al. 2006)

SSR type Total Percentage Monomer 31 48.44% Dimer 17 26.56% Trimer 15 23.43% Pentamer 1 1.56% Total number of sequences analyzed: 6581 Total number of SSRs found in sequences: 64 The mononucleotide 'T' has repeated 27 (42.18%) of the total SSR

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Sl.NO Accession NO SSR 1 CA794292 (T)11gtttatctag(T)10 2 CA794357 (T)11gtttatctag(T)10 3 CA794528 (GCA)7(ACA)6 4 CA794633 (T)11n(T)18 5 CA794635 (T)10ngn(T)17 6 CA794642 (T)11ggggggn(T)13 7 CA794644 (T)11gnttn(T)10 8 CA794654 (T)11gtttn(T)12 9 CA794669 (T)11nn(T)17 10 CA794671 (T)11gnct(TTC)7 11 CA794672 (T)14ngg(T)10 12 CA795033 (CAG)5cggccttatcaacggcg(GCA)5 13 CA795235 (T)17c(T)12 14 CA795383 (CAG)5cggccttatcaacggcg(GCA)5 15 CA795397 (T)11gtttatctag(T)10 16 CA795777 (T)11gtttatctag(T)10 17 CA796242 (CAG)5cggccttatcaacggcg(GCA)5 18 CA796395 (CAG)5cggccttatcaacggcg(GCA)5 19 CA796751 (CAG)5cggccttatcaacggcg(GCA)5 20 CA796862 (T)11gtttatctag(T)10
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