Untitled Document
Sl.NO Accession NO SSR SSR COUNT
1 CF9738451[A]23
2 CF9726571[A]43
3 CA7956251[A]21
4 CA7947021[A]23
5 CA7945921[G]25
6 CA7942161[T]24
7 CF9739671[T]22
8 CF9731351[T]22
9 CF9727061[T]22
10 CF9737451[T]23
11 CF9726881[T]23
12 CF9741181[T]24
13 CF9733691[T]26
14 CF9731301[T]26
15 CF9731931[T]26
16 CF9744351[T]27
17 CF9732451[T]27
18 CF9742041[T]27
19 CF9730821[T]27
20 CF9736431[T]29
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The in silico analysis of Cocoa EST - SSR by TRA (Bilgen. et al. 2004)

 

SSR type
Total
Percentage

Monomer

32
41.03%

Dimer

19
24.36%

Trimer

22
28.20%

Pentamer

1
1.28%

Hexamer

2
2.56%
Above decamer
1
1.28%

Total number of sequences analyzed: 6581

Total number of SSRs found in sequences: 78

The mononucleotide 'T' has repeated 28 (35.81%) of the total SSR

COCOA
 
 
EST/Contigs Library
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
OIL PALM
 
 
EST/Contigs Library
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
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