Untitled Document
Sl.NO Accession NO SSR SSR COUNT
1 CF9731141[T]30
2 CF9739311[T]30
3 CF9738971[T]31
4 CF9738321[T]31
5 CF9740281[T]31
6 CF9743861[T]31
7 CF9730381[T]31
8 CF9745881[T]33
9 CF9727411[T]34
10 CA7947161[T]27
11 CA7942181[T]29
12 CA7946561[T]30
13 CF9730471[T]28
14 CA7985302[AG]10
15 CA7974262[AG]11
16 CA7976162[AG]11
17 CA7979002[AG]16
18 CF9742372[AG]13
19 CA7963572[AT]11
20 CA7975322[AT]11
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The in silico analysis of Cocoa EST - SSR by TRA (Bilgen. et al. 2004)

 

SSR type
Total
Percentage

Monomer

32
41.03%

Dimer

19
24.36%

Trimer

22
28.20%

Pentamer

1
1.28%

Hexamer

2
2.56%
Above decamer
1
1.28%

Total number of sequences analyzed: 6581

Total number of SSRs found in sequences: 78

The mononucleotide 'T' has repeated 28 (35.81%) of the total SSR

COCOA
 
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
OIL PALM
 
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
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