Untitled Document
Sl.NO Accession NO SSR SSR COUNT
1 CA7973362[AT]11
2 CA7976922[CA]10
3 CA7947712[CT]10
4 CA7959072[CT]10
5 CA7983412[CT]11
6 CA7954132[GA]13
7 CA7980302[TA]11
8 CA7980182[TA]11
9 CA7973612[TA]14
10 CA7942472[TC]14
11 CA7982472[TC]15
12 CA7981782[TC]18
13 CA7977583[AAC]7
14 CA7977133[AAC]7
15 CA7973683[AAG]10
16 CA7984673[AAG]10
17 CF9728853[AAG]7
18 CA7947283[AGA]7
19 CA7978963[AGA]7
20 CA7945283[CAA]7
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The in silico analysis of Cocoa EST - SSR by TRA (Bilgen. et al. 2004)

 

SSR type
Total
Percentage

Monomer

32
41.03%

Dimer

19
24.36%

Trimer

22
28.20%

Pentamer

1
1.28%

Hexamer

2
2.56%
Above decamer
1
1.28%

Total number of sequences analyzed: 6581

Total number of SSRs found in sequences: 78

The mononucleotide 'T' has repeated 28 (35.81%) of the total SSR

COCOA
 
 
EST/Contigs Library
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
OIL PALM
 
 
EST/Contigs Library
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
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