About 5 entries found
Sl.NoContigsSSR RepeatsRepeat TypeStartEndLength
1 abnapex.fasta.Contig47 dinucleotide CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 77 110 34
2 maleinflor.fasta.Contig19 trinucleotide CCTCCTCCTCCTCCTCCTCCTC 96 117 22
3 maleinflor.fasta.Contig27 trinucleotide CAGCAGCAGCAGCAGCAGCAG 196 216 21
4 maleinflor.fasta.Contig42 trinucleotide GGAGGAGGAGGAGGGGAGGAG 190 210 21
5 immzygryo.fasta.Contig6 tetranucleotide TATGTATGTATGTATGTATG 383 402 20
The Computational analysis of Oil Palm contigs - SSR by SSR Primer ( (Robinson et al . 2004 )

 

SSR type
Total
Percentage

Dimer

1
20.00%

Trimer

3
60.00%

Tetramer

1
20.00%

Total number of sequences analyzed: 187

Total number of SSRs found in sequences: 5

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS