Untitled Document
Sl.NO Accession NO SSR Type SSR Length
1 CN599840DIMERCT17
2 CN600805DIMERCT18
3 CN599787DIMERCT18
4 CN599646DIMERCT19
5 CN599891DIMERCT30
6 CN601514DIMERGA11
7 CN601713DIMERGA37
8 CN600545DIMERTC10
9 CN599787DIMERTC10
10 CN601118DIMERTC11
11 CN600828DIMERTC12
12 CN600556DIMERTC12
13 CN600560DIMERTC20
14 CN600534DIMERTG15
15 CN599831TRIMERAGG9
16 CN600166TRIMERCAC7
17 CN600749TRIMERCAG7
18 CN601056TRIMERCCG8
19 CN601492TRIMERCCT9
20 CN600930TRIMERCCT10
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The in silico analysis of Oil Palm EST - SSR by TRA (Bilgen. et al. 2004)

 

SSR type
TOTAL
Percentage

Monomer

84

63.63%

Dimer

30

22.72%

Trimer

10

7.57%

Tetramer

1

0.75%

Pentamer

0

0.00%

Hexamer

5

3.78%

Nanomer

1

0.75%

Above decamer

1

0.75%

Total number of sequences analyzed: 2413

Total number of SSRs found in sequences: 132

The mononucleotide 'T' has repeated 79 (59.84%) pf the total SSR

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS