Untitled Document
Sl.NO Accession NO SSR Type SSR Length
1 CN600706TRIMERCGA7
2 CN600741TRIMERGAG8
3 CN601534TRIMERGTT10
4 CN599974TRIMERTTA7
5 CN600866TETRAMER CTTC7
6 CN601449HEXAMERCAAGCC4
7 CN599492HEXAMERCTCTCC4
8 CN599414HEXAMERCTCTCC4
9 CN599632HEXAMERGGAGAG4
10 CN601178 HEXAMERTTTTTC4
11 CN600768NANOMERTTTCCTTTG3
12 CN600733ABOVE DECAMER(11) CTCTTAGCTAA3
13
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The in silico analysis of Oil Palm EST - SSR by TRA (Bilgen. et al. 2004)

 

SSR type
TOTAL
Percentage

Monomer

84

63.63%

Dimer

30

22.72%

Trimer

10

7.57%

Tetramer

1

0.75%

Pentamer

0

0.00%

Hexamer

5

3.78%

Nanomer

1

0.75%

Above decamer

1

0.75%

Total number of sequences analyzed: 2413

Total number of SSRs found in sequences: 132

The mononucleotide 'T' has repeated 79 (59.84%) pf the total SSR

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS