Untitled Document
Sl.NO Accession NO SSR No SSR Type SSR Start End
1 CN6001621p1(A)4688133
2 CN5993801p1(A)49398446
3 CN5995541p1(T)20423
4 CN5994181p1(T)20120
5 CN5995321p1(T)201029
6 CN5997721p1(T)20625
7 CN6005071p1(T)20120
8 CN6002921p1(T)20221
9 CN6004051p1(T)20423
10 CN6006151p1(T)20827
11 CN5993921p1(T)20423
12 CN6000371p1(T)20524
13 CN6015351p1(T)202140
14 CN5994891p1(T)20524
15 CN5995351p1(T)20625
16 CN5999791p1(T)20423
17 CN6002481p1(T)21525
18 CN5994391p1(T)211636
19 CN6000931p1(T)211737
20 CN6011151p1(T)211838
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The in silico analysis of Oil Palm EST - SSR by MISA (Thiel et al. 2003)

 

SSR type
Total
Percentage

Monomer

84

49.70%

Dimer

29

17.15%

Trimer

13

7.69%

Tetramer

5

2.95%

Compound repeats

38

22.48%

Total number of sequences analyzed: 2413

Total number of SSRs found in sequences: 169

The mononucleotide 'T' has repeated 80 (47.33%) pf the total SSR

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS