Untitled Document
Sl.NO Accession NO SSR Repeat Type SSR
1 CA7985441p3(GAA)8
2 CF9728461p3(TTC)8
3 CF9728851p3(AAG)7
4 CF9729091p3(CAT)8
5 CF9740431p3(TCT)8
6 CF9742391p3(TCA)9
7 CF9726611p4(ATAA)5
8 CF9728001p4(ATAA)5
9 CF9743061p4(GTAT)5
10 CF9744431p4(GTAT)5
11 CA7979231p6(CATCAC)5
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The Computational analysis of Cocoa EST - SSR by MISA (Thiel et al. 2003)

 

SSR type
Total
Percentage

Monomer

33
29.73%

Dimer

17
15.31%

Trimer

19
17.12%

Tetramer

4
3.60%
Hexamer
1
0.90%

Compound repeats

37
33.33%

Total number of sequences analyzed: 6581

Total number of SSRs found in sequences: 111

The mononucleotide 'T' has repeated 26 (23.42%) pf the total SSR
COCOA
 
 
EST/Contigs Library
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
OIL PALM
 
 
EST/Contigs Library
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS