Untitled Document
Sl.NO Accession NO SSR Repeat Type SSR
1 CA7976921p2(CA)10
2 CA7979001p2(AG)16
3 CA7981781p2(TC)18
4 CA7982471p2(TC)15
5 CA7983411p2(CT)11
6 CA7985301p2(AG)10
7 CF9742371p2(AG)13
8 CA7943521p3(GAA)8
9 CA7947281p3(AGA)7
10 CA7949701p3(TCA)7
11 CA7951991p3(GAA)8
12 CA7952001p3(GAA)8
13 CA7973681p3(AAG)10
14 CA7977131p3(AAC)7
15 CA7977581p3(AAC)7
16 CA7978961p3(AGA)7
17 CA7979951p3(GAA)7
18 CA7980381p3(CTT)10
19 CA7982141p3(TCT)7
20 CA7984671p3(AAG)10
<Prev>

 

The Computational analysis of Cocoa EST - SSR by MISA (Thiel et al. 2003)

 

SSR type
Total
Percentage

Monomer

33
29.73%

Dimer

17
15.31%

Trimer

19
17.12%

Tetramer

4
3.60%
Hexamer
1
0.90%

Compound repeats

37
33.33%

Total number of sequences analyzed: 6581

Total number of SSRs found in sequences: 111

The mononucleotide 'T' has repeated 26 (23.42%) pf the total SSR
COCOA
 
 
EST/Contigs Library
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
OIL PALM
 
 
EST/Contigs Library
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS