Untitled Document
Sl.NO Accession NO SSR Repeat Type SSR
1 CF9738321p1(T)31
2 CF9738451p1(A)23
3 CF9738971p1(T)31
4 CF9739671p1(T)22
5 CF9740281p1(T)31
6 CF9741181p1(T)24
7 CF9742041p1(T)27
8 CF9743861p1(T)31
9 CF9744351p1(T)27
10 CF9745881p1(T)33
11 CA7942471p2(TC)14
12 CA794771p2(CT)10
13 CA7954131p2(GA)13
14 CA7959071p2(CT)10
15 CA7963571p2(AT)11
16 CA7973361p2(AT)11
17 CA7973611p2(TA)14
18 CA7974261p2(AG)11
19 CA7975321p2(AT)11
20 CA7976161p2(AG)11
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The Computational analysis of Cocoa EST - SSR by MISA (Thiel et al. 2003)

 

SSR type
Total
Percentage

Monomer

33
29.73%

Dimer

17
15.31%

Trimer

19
17.12%

Tetramer

4
3.60%
Hexamer
1
0.90%

Compound repeats

37
33.33%

Total number of sequences analyzed: 6581

Total number of SSRs found in sequences: 111

The mononucleotide 'T' has repeated 26 (23.42%) pf the total SSR
COCOA
 
 
EST/Contigs Library
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
OIL PALM
 
 
EST/Contigs Library
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS