Untitled Document
Sl.NO Accession NO SSR Repeat Type SSR
1 CA7946561p1(T)30
2 CA7947021p1(A)23
3 CA7947161p1(T)27
4 CA7956251p1(A)21
5 CF9726571p1(A)43
6 CF9726881p1(T)23
7 CF9727061p1(T)22
8 CF9727411p1(T)34
9 CF9730471p1(T)28
10 CF9730821p1(T)27
11 CF9731141p1(T)30
12 CF9731301p1(T)26
13 CF9731351p1(T)22
14 CF9731481p1(T)20
15 CF9731931p1(T)26
16 CF9732451p1(T)27
17 CF9733691p1(T)26
18 CF9736431p1(T)29
19 CF9737451p1(T)23
20 CF9737991p1(T)20
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The Computational analysis of Cocoa EST - SSR by MISA (Thiel et al. 2003)

 

SSR type
Total
Percentage

Monomer

33
29.73%

Dimer

17
15.31%

Trimer

19
17.12%

Tetramer

4
3.60%
Hexamer
1
0.90%

Compound repeats

37
33.33%

Total number of sequences analyzed: 6581

Total number of SSRs found in sequences: 111

The mononucleotide 'T' has repeated 26 (23.42%) pf the total SSR
COCOA
 
 
EST/Contigs Library
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
OIL PALM
 
 
EST/Contigs Library
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS