Untitled Document
Sl.NO Accession NO SSR No SSR Type SSR Start End
1 CN6005011p1(T)26631
2 CN5999581p1(T)27228
3 CN5995891p1(T)28936
4 CN6003741p1(T)28633
5 CN6002871p1(T)29836
6 CN5999111p1(T)29634
7 CN6002511p1(T)30736
8 CN6004071p1(T)31636
9 CN6005811p1(T)32637
10 CN5996311p1(T)32435
11 CN6002741p1(T)33133
12 CN5994351p1(T)33638
13 CN6005581p1(T)34538
14 CN5999041p1(T)34639
15 CN6004571p1(T)341043
16 CN5995371p1(T)35640
17 CN6000171p1(T)39644
18 CN6006041p1(T)391048
19 CN6016391p1(T)401857
20 CN5994361p1(T)40544
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The in silico analysis of Oil Palm EST - SSR by MISA (Thiel et al. 2003)

 

SSR type
Total
Percentage

Monomer

84

49.70%

Dimer

29

17.15%

Trimer

13

7.69%

Tetramer

5

2.95%

Compound repeats

38

22.48%

Total number of sequences analyzed: 2413

Total number of SSRs found in sequences: 169

The mononucleotide 'T' has repeated 80 (47.33%) pf the total SSR

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS