Untitled Document
Sl.NO Accession NO SSR No SSR Type SSR Start End
1 CN6000121p1(T)4296137
2 CN6001611p1(T)431153
3 CN5999981p1(T)43143
4 CN5998721p1(T)44649
5 CN6013641p1(T)461358
6 CN6006311p1(T)47652
7 CN5999451p1(T)47147
8 CN6003851p1(T)47147
9 CN6005801p1(T)48653
10 CN5994121p1(T)48653
11 CN5996351p1(T)49149
12 CN6000921p1(T)52556
13 CN6009051p1(T)55761
14 CN5994591p1(T)56560
15 CN5999811p1(T)57460
16 CN6000751p1(T)59664
17 CN5994261p1(T)61666
18 CN5999001p1(T)62667
19 CN6001801p1(T)63668
20 CN6010461p1(T)671985
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The in silico analysis of Oil Palm EST - SSR by MISA (Thiel et al. 2003)

 

SSR type
Total
Percentage

Monomer

84

49.70%

Dimer

29

17.15%

Trimer

13

7.69%

Tetramer

5

2.95%

Compound repeats

38

22.48%

Total number of sequences analyzed: 2413

Total number of SSRs found in sequences: 169

The mononucleotide 'T' has repeated 80 (47.33%) pf the total SSR

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS