Untitled Document
Sl.NO Accession NO SSR No SSR Type SSR Start End
1 CN6007061p3(CGA)7224244
2 CN6012511p3(CTC)7525
3 CN6007411p3(GAG)8206229
4 CN5999742p3(TTA)7184204
5 CN6008661p4(CTTC)7229
6 CN6017791p4(GAGG)5111130
7 CN6016681p4(TATG)5372391
8 CN6017711p4(TATG)5442461
9 CN601251.2p4(TTTA)5153172
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The in silico analysis of Oil Palm EST - SSR by MISA (Thiel et al. 2003)

 

SSR type
Total
Percentage

Monomer

84

49.70%

Dimer

29

17.15%

Trimer

13

7.69%

Tetramer

5

2.95%

Compound repeats

38

22.48%

Total number of sequences analyzed: 2413

Total number of SSRs found in sequences: 169

The mononucleotide 'T' has repeated 80 (47.33%) pf the total SSR

 

COCOA
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
OIL PALM
 
 
 
EST derived SSR
Contigs derived SSR
Primer Results
 
 
Cocoa & Oilpalm
 
 
SSR WEB TOOLS